Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798388.1_cds_XP_016460060.1_5322
CDS Infomation

[gene=LOC107783579] [db_xref=GeneID:107783579] [protein=FHA domain-containing protein DDL] [protein_id=XP_016460060.1] [location=join(13022..14044,14896..14924,16157..16223,16473..16530,17419..17511,18766..18880,18965..19012,19105..19150,19248..19318,19780..19816)] [gbkey=CDS]
Sequence

ATGGGGCGCAGTGACTCTAGATCACCTGCTAGGGGTCGTGGATCTCCTCGTAAGAGGAGC
CCTTCACGCAGGGATAGCTCACCTGCTCGGAAAAGGAGTTCGCATGCTGCAAAATCAGCT
GGAGCAGAGAAGCCTTCTAGCCGTAATAGGTCCCCGAGATGTCCAAGGTCAAGATCTCCT
GTTCCTCTTTCACCTGAAAGGGAGAGGCCTTCTAGTCGCAATAGATCCCCAAAACGCAGA
AAATCAATCTCCCCTGCATCTCACTCCCCAATCAGAGAGAAACCCTCAAGTCGCACAAAG
TCTCCCAAACGAGCTAAGTCAAGGTCTCCTGATTCGAGGTTATTACAGGTTGAGAAGTCT
TCAGGCCGAGCCAGGTCTCCTAGACGTGCCAAGTTGCAGTCTCCTGAATCTCGCTCACGC
TCACCCTCACCGCGAACAAAAAGGCTAAGGAGAGCAGAACGAGGGACTGAAGAAAAATCG
AGGGAGCGGGAGCCTGAGAAAAATCATGGTAGAGCTAGTGATAAAGCTGCACATAATGAA
AAGGGTTCCGACAGAATGGTGCCTGAATCTCGCGCGCCCTCACCACGAACAAAAAGACTA
AGGAGAGTAGAACGAGAGACTGAAGAAAAGTCGAGGGAGCGGGATGAGAAAAATCATGGT
AGACCTAGTGATAGGGCTACACATAGGGAGAAGGATTCTGAAAGAATAGTCCCTGAATCC
CGCTCACCCTCACCACGAACAAAAAGGCTAAGGAGAGCAGAACGAGAAACTGAAGAAAAG
TCAAGGGAGCGGGAGCCTGAGAAAAATCATGGTAGAGCTAGTGATAGGGCTACACACAGG
GAAAGGGACTCTGACAGAATGGTGCAAAATGAAAGGAGAGAGAAAAGATCAGGAAAGGAT
GCACTGGAGAATGGATCTTCTAAGTCAAGAAATGATCGGTCAGCTTCACCTTCAGAACGT
CAGCATAGGAGTCGACACAGATCGAGATCACCTGCAGCAGCAGATAGTAGAGCACACGAT
GAGGTGACAAACTCAAGGAGAGGTGAACACAGGAATGGTGATGATGACTCCTTATCTAAA
ATGCAGGCGGCCGAGGAGGCTTTGGAGTCTAAAAATAAAGACAAGCCTTCGTTTGAGCTC
TCTGGAAAGCTTGCAGCAGAAACTAATCGAGTAAGAGGTATAACGCTTCTCTTTAATGAG
CCACCAGATGCTAGAAAACCGGACATAAGATGGCGCTTGTATGTTTTTAAGGGTGGTGAA
GTCCTCAATGAGCCTCTGTATGTTCATCGCCAAAGTTGTTATCTTTTTGGGAGAGAACGG
AGGGTTGCAGACATTCCTACGGATCACCCATCTTGCAGCAAGCAACATGCTGTCCTCCAG
TACAGGCAAGTTGAGAAGGACAATCCTGATGGTACTTCATCGAAGCAAGTAAGGCCGTAC
GTAATGGATCTTGGAAGCACTAATGGCACTTTCATTAATGAAAATCGGATTGAGCCCCAG
AGATACTATGAGCTATTAGAAAAGGATACACTTAAGTTTGGTAATAGTAGCCGAGAATAT
GTGCTGCTTCACGAGAATTCAGCATGA

Peptide Sequence

PEP ID

XP_016460060.1
PEP Infomation

PREDICTED: FHA domain-containing protein DDL [Nicotiana tabacum]
Sequence

MGRSDSRSPARGRGSPRKRSPSRRDSSPARKRSSHAAKSAGAEKPSSRNRSPRCPRSRSP
VPLSPERERPSSRNRSPKRRKSISPASHSPIREKPSSRTKSPKRAKSRSPDSRLLQVEKS
SGRARSPRRAKLQSPESRSRSPSPRTKRLRRAERGTEEKSREREPEKNHGRASDKAAHNE
KGSDRMVPESRAPSPRTKRLRRVERETEEKSRERDEKNHGRPSDRATHREKDSERIVPES
RSPSPRTKRLRRAERETEEKSREREPEKNHGRASDRATHRERDSDRMVQNERREKRSGKD
ALENGSSKSRNDRSASPSERQHRSRHRSRSPAAADSRAHDEVTNSRRGEHRNGDDDSLSK
MQAAEEALESKNKDKPSFELSGKLAAETNRVRGITLLFNEPPDARKPDIRWRLYVFKGGE
VLNEPLYVHRQSCYLFGRERRVADIPTDHPSCSKQHAVLQYRQVEKDNPDGTSSKQVRPY
VMDLGSTNGTFINENRIEPQRYYELLEKDTLKFGNSSREYVLLHENSA

Transcript Sequence

Gene sequence data has not been registered.